Ciencias Exactas y Ciencias de la Salud
Permanent URI for this collectionhttps://hdl.handle.net/11285/551039
Pertenecen a esta colección Tesis y Trabajos de grado de las Maestrías correspondientes a las Escuelas de Ingeniería y Ciencias así como a Medicina y Ciencias de la Salud.
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- Phylotranscriptomic Analysis of Pigment Biosynthesis in the Caryophyllales(Instituto Tecnológico y de Estudios Superiores de Monterrey, 2024-12-02) Gutierrez Vences, Alma Yesenia; Rodríguez López, Carlos Eduardo; Chavez Santoscoy, Rocío; Dang, Thu-Thuy; Díaz de la Garza, Rocío; Treviñp, Manuel; School of Engineering and Sciences; Campus MonterreyIn plants, color is given by secondary metabolites, pigments, that absorb and emit color due to their chemical structure. Betalains are a class of tyrosine-derived pigments found exclusively in the Caryophyllales order, where they are concurrent with the anthocyanin pigments. These two types of pigments show a mutually exclusive pattern of expression rooted in a complex homoplastic distribution. Although the genetic events that led to the emergence of betalains in the Caryophyllales is known, the exact genetic evolutionary path that led to mutual exclusion remains elusive with multiple theories with a single or multiple emergences being proposed. This thesis combines orthology-based phylogenetic correlation analyses with comparative transcriptomics to investigate the molecular and evolutionary drivers of pigment biosynthesis, focusing on transcriptional regulation, pigment structural modification, and transport mechanisms. Co-expression analysis revealed potential regulatory co-option, suggesting that betalain-producing species may have repurposed ancestral anthocyanin regulatory mechanisms to drive their pigment emergence. Additionally, candidate enzymes such as UGT, SCPL, and MT were identified as key players in pigment structural modification and stabilization in betalain-producing species. The research also presents novel insights into the role of cellular transport mechanisms in pigment exclusion. Genes in orthogroups with statistically different occupancy annotated in processes related to vesicle trafficking were found to coexpress with biosynthetic modules, suggesting that transport may contribute significantly to the mutual exclusion of anthocyanins and betalains. These findings hint at a possible loss and co-option of anthocyanin transport mechanisms for betalain sequestration in vacuoles, raising questions about how shifts in transport specificity may drive pigment divergence.
- Development of a multi-component disjointed tissue culture system using three-dimensionally printed polymeric scaffolds and microfluidic pumping(Instituto Tecnológico y de Estudios Superiores de Monterrey, 2024-12) Romero Zepeda, Claudia Alejandra; Lozano Sánchez, Luis Marcelo; emipsanchez; Perfecto Avalos, Yacanxóchitl; García González, Alejandro; García Varela, Rebeca; School of Engineering and Sciences; Campus León; Chaires Oria, Jorge IsaacIn-vitro cellular culture plays a crucial role in preclinical research. While cost-effective, the pre- vailing 2D culture approach falls short in simulating realistic cellular interactions when these cells are grown in different but interacting spaces. Organs-on-a-Chip (OoC) devices have been developed to address this limitation, creating controlled micro-environments that mimic in-vivo tissue interaction conditions. This research addressed designing and assessing a microfluidic chip device based on ad- ditive manufacturing to analyze fibroblast and monocyte cell interaction grown in a separate culture apparatus. The OoC devices were created using Computer-Aided Design (CAD), and additive manu- facturing strategies using translucent resin as constructive material. The developed chip consisted of 200 mm2 cell culture area, a glass window for monitoring, and two inlets and outlets for fluid transfer and sampling. An instrumented peristaltic micro-pumping system induces fluid motion through the tubing that connects the manufactured microchips. Here, we show the ability of the developed 3D printed system to culture different cell lines, allow treatment addition without disturbing the system, and connect with a continuous flow between the devices without generating detectable cellular stress by enzymatic quantification. Finally, the interconnected system communicates between fibroblast and monocyte cultures by connecting two chips with micropumps through microscopic and cellular stress markers in selected cell lines. This results in a prototype for a multi-organ-on-a-chip-like device.
